syringafactin D
- Norine ID: NOR01078
- DOI: 10.26097/nor01078
- Family: syringafactin
- Synonym(s): syringafactin D;
- Activity: surfactant
- Category: lipopeptide
- Comment: Components of biosurfactant complex produced by some isolates of P. syringae. A bioinformatics analysis of the C/E domains of the synthetase has predicted that Leu2, Leu3, Gln4, Thr6 and Leu8 probably have a D-isomery but it has not yet been evidenced by structural determination.
- Source: norine
- Contributor (creation): Berti Ad
- Entry information:
- status: curated - change status to non-NRP (Norine validators only)
- last modification date: 2013-06-18 by Norine Team [CRIStAL (UMR CNRS 9189), ex-LIFL, France, Charles Viollette Institute, ProBioGEM team, Lille, France, University of Lille, France]
- view all entry history
- Type: linear
- Number of monomers: 9
- Monomeric composition :
1 C12:0-OH(3) 2 Leu 3 Leu 4 Gln 5 Leu 6 Thr 7 Val 8 Leu 9 Leu - Graph representation: C12:0-OH(3),Leu,Leu,Gln,Leu,Thr,Val,Leu,Leu @1 @0,2 @1,3 @2,4 @3,5 @4,6 @5,7 @6,8 @7
- Atomic structure:
Peptide's atomic structure image is not available because smiles is not present.
- Pseudomonas syringae pv. tomato
- gram: negative
- taxid: 323 (view NCBI taxonomy browser)
- Links between organisms producing the syringafactin D: Pseudomonas syringae pv. tomato
- Identification of a biosynthetic gene cluster and the six associated lipopeptides involved in swarming motility of Pseudomonas syringae pv. tomato DC3000
Thomas MG, Berti AD, Greve NJ, Christensen QH, Journal of bacteriology , 2007, Sep,189(17):6312-23.
DOI: 10.1128/JB.00725-07
pubMed: 17601782
Return to annotations search