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halicylindramide D


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  • Norine ID: NOR00495
  • DOI: 10.26097/nor00495
  • Family: halicylindramide
  • Synonym(s): halicylindramide D;
  • Activity: antimicrobial, toxin
  • Category: peptide
  • Formula: C73H99BrN19O20S
  • Monoisotopic mass: 1672.621785403 g/mol
  • Source: norine
  • Contributor (creation): Norine Team [CRIStAL (UMR CNRS 9189), ex-LIFL, France, Charles Viollette Institute, ProBioGEM team, Lille, France, University of Lille, France]
  • Entry information:
  • Type: partial cyclic
  • Number of monomers: 13
  • Smiles: CC(C)C(NC(=O)C(NC(=O)C2CCCN2(C(=O)C(Cc1ccc(cc1)Br)NC(=O)C(C)NC=O))C(C)C)C(=O)NC(Cc3c[nH]c4ccccc34)C(=O)NC(CCCNC(=N)N)C(=O)NC(CS(=O)(=O)O)C(=O)NC6C(C)OC(=O)C(CC(N)=O)NC(=O)CNC(=O)C(Cc5ccccc5)NC(=O)C(CCC(N)=O)N(C)C6(=O)

  • Graph inference:



  • Monomeric composition :
    1
    D-NFo-Ala
    2
    Br-Phe
    3
    Pro
    4
    D-Val
    5
    Val
    6
    D-Trp
    7
    Arg
    8
    D-CysA
    9
    Thr
    10
    NMe-Gln
    11
    D-Phe
    12
    Gly
    13
    Asn
  • Graph representation: D-NFo-Ala,Br-Phe,Pro,D-Val,Val,D-Trp,Arg,D-CysA,Thr,NMe-Gln,D-Phe,Gly,Asn @1 @0,2 @1,3 @2,4 @3,5 @4,6 @5,7 @6,8 @7,9,12 @8,10 @9,11 @10,12 @8,11

  • Atomic structure:
    • Chemical structure
    rBAN vizualisation:
  • Halichondria cylindrata

  • Links between organisms producing the halicylindramide D: Halichondria cylindrata
  • Halicylindramides D and E, antifungal peptides from the marine sponge Halichondria cylindrata
    Matsunaga S, Fusetani N, Li HY, Journal of natural products , 1996, Feb,59(2):163-6.
    DOI: 10.1021/np9600309
    pubMed: 8991950


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