avoparcin-epsilon
- Norine ID: NOR00930
- DOI: 10.26097/nor00930
- Family: avoparcin
- Synonym(s): avoparcin-epsilon;
- Activity: antimicrobial
- Category: glycopeptide
- Formula: C83H91Cl2N9O31
- Monoisotopic mass: 1779.5198026589999 g/mol
- Comment: Avoparcin consists of a mixture of several structurally similar glycopeptide analogs, of which alpha and beta avoparcin are the major components. Two bonds of the central Hpg are due to oxidative ring closure reactions.
- Source: norine
- Contributor (creation): Norine Team [CRIStAL (UMR CNRS 9189), ex-LIFL, France, Charles Viollette Institute, ProBioGEM team, Lille, France, University of Lille, France]
- Entry information:
- status: curated - change status to non-NRP (Norine validators only)
- last modification date: 2018-09-12 by Mickael Chevalier [Charles Viollette Institute, ProBioGEM team, Lille, France, University of Lille, France]
- view all entry history
- Type: other
- Number of monomers: 11
- Monomeric composition :
1 Rha 
2 NMe-Hpg 
3 Tyr 
4 D-Man 
5 Cl-Hpg 
6 Hpg 
7 Ria 
8 D-Glc 
9 bOH-Cl-Tyr 
10 Hpg
11 Dhpg 
- Graph representation: Rha,NMe-Hpg,Tyr,D-Man,Cl-Hpg,Hpg,Ria,D-Glc,bOH-Cl-Tyr,Hpg,Dhpg @1 @2,0 @3,4,5,1 @2 @2,5 @4,2,6,8,9 @7,5 @6 @5,10,9 @10,5,8 @8,9
- Atomic structure:
Peptide's atomic structure image is not available because smiles is not present.
- Streptomyces candidus
- gram: positive
- synonyms: Actinomyces candidus
- taxid: 67283 (view NCBI taxonomy browser)
- Links between organisms producing the avoparcin-epsilon: Streptomyces candidus
- Avoparcin, a new macrocyclic antibiotic chiral run buffer additive for capillary electrophoresis
Ekborg-Ott KH, Zientara GA, Schneiderheinze JM, Gahm K, Electrophoresis , 1999, Sep,20(12):2438-57.
DOI: 10.1002/(SICI)1522-2683(19990801)20:12<2438::AID-ELPS2438>3.0.CO;2-C
pubMed: 10499337
Return to annotations search