syringopeptin 508B
- Norine ID: NOR00874
- DOI: 10.26097/nor00874
- Family: syringopeptin
- Synonym(s): syringopeptin 508B;
- Activity: antimicrobial, toxin
- Category: lipopeptide
- Formula: C106H174N24O27
- Monoisotopic mass: 2215.298026482 g/mol
- Comment: The amino acid stereochemistry has not been identified.
- Source: norine
- Contributor (creation): Norine Team [CRIStAL (UMR CNRS 9189), ex-LIFL, France, Charles Viollette Institute, ProBioGEM team, Lille, France, University of Lille, France]
- Entry information:
- status: curated - change status to non-NRP (Norine validators only)
- last modification date: 2018-09-12 by Mickael Chevalier [Charles Viollette Institute, ProBioGEM team, Lille, France, University of Lille, France]
- view all entry history
- Type: partial cyclic
- Number of monomers: 23
- Monomeric composition :
1 C14:0-OH(3) 2 dhAbu 3 Pro 4 Val 5 Leu 6 Ala 7 Ala 8 Leu 9 Val 10 Ala 11 Ala 12 Val 13 Ala 14 Ala 15 dhAbu 16 aThr 17 Ser 18 Ala 19 dhAbu 20 Ala 21 Dab 22 Dab 23 Tyr - Graph representation: C14:0-OH(3),dhAbu,Pro,Val,Leu,Ala,Ala,Leu,Val,Ala,Ala,Val,Ala,Ala,dhAbu,aThr,Ser,Ala,dhAbu,Ala,Dab,Dab,Tyr @1 @0,2 @1,3 @2,4 @3,5 @4,6 @5,7 @6,8 @7,9 @8,10 @9,11 @10,12 @11,13 @12,14 @13,15 @14,16,22 @15,17 @16,18 @17,19 @18,20 @19,21 @20,22 @15,21
- Atomic structure:
Peptide's atomic structure image is not available because smiles is not present.
- Pseudomonas syringae pv. lachrymans
- gram: negative
- taxid: 53707 (view NCBI taxonomy browser)
- Links between organisms producing the syringopeptin 508B: Pseudomonas syringae pv. lachrymans
- Novel cyclic lipodepsipeptide from Pseudomonas syringae pv. lachrymans strain 508 and syringopeptin antimicrobial activities
Grgurina I, Fogliano V, Mannina L, Takemoto JY, Sorensen KN, Cruciani O, Fiore A, Bensaci M, Pocsfalvi G, Antimicrobial agents and chemotherapy , 2005, Dec,49(12):5037-45.
DOI: 10.1128/AAC.49.12.5037-5045.2005
pubMed: 16304170
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