Peptide

Norine ID: NOR00166
DOI: 10.26097/nor00166
Family: pyoverdin
Synonym(s): pyoverdin G4R;
Activity: siderophore
Category: chromopeptide
Formula: C44H60N14O18
Monoisotopic mass: 1072.421001186 g/mol
Source: norine
Contributor (creation): Norine Team [CRIStAL (UMR CNRS 9189), ex-LIFL, France, Charles Viollette Institute, ProBioGEM team, Lille, France, University of Lille, France]
Entry information:
- status: curated - change status to non-NRP (Norine validators only)
- last modification date: 2018-12-01 by Emma Ricart Altimiras [Swiss Institute of Bioinformatics, SIB]
- view all entry history

Type: partial cyclic
Number of monomers: 8
Smiles: C1CC(C(=O)N(C1)O)NC(=O)[C@H](CO)NC(=O)CNC(=O)C2CCN=C(N2)[C@@H]([C@H](C(=O)O)O)NC(=O)[C@H](CCCN)NC(=O)[C@H](CC(=O)O)NC(=O)[C@@H]3CCNC4N3C5=CC(=C(C=C5C=C4NC(=O)CCC(=O)N)O)O
Graph inference:

Monomeric composition :

N-Suc

ChrP

Asp

Orn

D-OH-Asp

Dab

Gly

Ser

OH-cOrn

Graph representation: N-Suc,ChrP,Asp,Orn,D-OH-Asp,Dab,Gly,Ser,OH-cOrn @1 @0,2 @1,3 @2,4,4 @3,3,5 @4,6 @5,7 @6,8 @7
Atomic structure:

vizualisation:

gram: negative
synonyms: Pseudomonas ovalis,Pseudomonas arvilla,Arthrobacter siderocapsulatus,Pseudomonas striata,Pseudomonas rugosa,Pseudomonas incognita,Pseudomonas convexa,Pseudomonas eisenbergii,Bacillus putidus
taxid: 303 (view NCBI taxonomy browser)

A fast screening method for the identification of siderophores from fluorescent Pseudomonas spp. by liquid chromatography/electrospray mass spectrometry
Budzikiewicz H, Fuchs R, Kilz S, Lenz C, Journal of mass spectrometry : JMS , 1999, Apr,34(4):281-90.
DOI: 10.1002/(SICI)1096-9888(199904)34:4<281::AID-JMS750>3.0.CO;2-M
pubMed: 10226359

Bacterial iron transport: 1H NMR determination of the three-dimensional structure of the gallium complex of pyoverdin G4R, the peptidic siderophore of Pseudomonas putida G4R
Abdallah MA, Atkinson RA, Salah El Din AL, Kieffer B, Lefevre JF, Biochemistry , 1998, Nov 10,37(45):15965-73.
DOI: 10.1021/bi981194m
pubMed: 9843403

Norine