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nagahamide A


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  • Norine ID: NOR00441
  • DOI: 10.26097/nor00441
  • Family: nagahamide
  • Synonym(s): nagahamide A;
  • Activity: antimicrobial
  • Category: peptide
  • Formula: C39H64N8O14
  • Monoisotopic mass: 868.4541987959999 g/mol
  • Comment: Nagahamide A is a putative NRPS product (no synthetase genes identified).
  • Source: norine
  • Contributor (creation): Norine Team [CRIStAL (UMR CNRS 9189), ex-LIFL, France, Charles Viollette Institute, ProBioGEM team, Lille, France, University of Lille, France]
  • Entry information:
  • Type: cyclic
  • Number of monomers: 7
  • Smiles: CCC[C@H](C)[C@@H]1[C@H]([C@H](C/C=C\C=C/C(=O)NC[C@H](CC(=O)N[C@H](C(=O)NCC(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)O1)C(C)C)[C@H](C(=O)N)O)[C@@H](C)C(=O)N)CO)O)OC)C

  • Graph inference:



  • Monomeric composition :
    1
    Ser
    2
    Gly
    3
    bMe-Asn
    4
    OH-Asn
    5
    Val
    6
    DHMDA
    7
    OH-4Abu
  • Graph representation: Ser,Gly,bMe-Asn,OH-Asn,Val,DHMDA,OH-4Abu @1,6 @0,2 @1,3 @2,4 @3,5 @4,6 @0,5

  • Atomic structure:
    • Chemical structure
    rBAN vizualisation:
  • Theonella swinhoei
  • taxid: 37505 (view NCBI taxonomy browser)

  • Links between organisms producing the nagahamide A: Theonella swinhoei
  • Nagahamide A, an antibacterial depsipeptide from the marine sponge Theonella swinhoei
    Okada Y, Matsunaga S, van Soest RW, Fusetani N, Organic letters , 2002, Sep 5,4(18):3039-42.
    DOI: 10.1021/ol0262791
    pubMed: 12201711


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