avoparcin-alpha
- Norine ID: NOR00928
- DOI: 10.26097/nor00928
- Family: avoparcin
- Synonym(s): avoparcin-alpha;
- Activity: antimicrobial
- Category: glycopeptide
- Formula: C89H104ClN9O35
- Monoisotopic mass: 1893.632333853 g/mol
- Comment: Avoparcin consists of a mixture of several structurally similar glycopeptide analogs, of which alpha and beta avoparcin are the major components. Two bonds of the central Hpg are due to oxidative ring closure reactions.
- Source: norine
- Contributor (creation): Norine Team [CRIStAL (UMR CNRS 9189), ex-LIFL, France, Charles Viollette Institute, ProBioGEM team, Lille, France, University of Lille, France]
- Entry information:
- status: curated - change status to non-NRP (Norine validators only)
- last modification date: 2018-09-12 by Mickael Chevalier [Charles Viollette Institute, ProBioGEM team, Lille, France, University of Lille, France]
- view all entry history
- Type: other
- Number of monomers: 12
- Monomeric composition :
1 Rha 2 NMe-Hpg 3 Tyr 4 D-Man 5 Hpg 6 Hpg 7 Ria 8 D-Glc 9 bOH-Cl-Tyr 10 Ria 11 Hpg 12 Dhpg - Graph representation: Rha,NMe-Hpg,Tyr,D-Man,Hpg,Hpg,Ria,D-Glc,bOH-Cl-Tyr,Ria,Hpg,Dhpg @1 @2,0 @3,4,5,1 @2 @2,5 @4,2,6,8,10 @7,5 @6 @9,5,11,10 @8 @11,5,8 @8,10
- Atomic structure:
Peptide's atomic structure image is not available because smiles is not present.
- Streptomyces candidus
- gram: positive
- synonyms: Actinomyces candidus
- taxid: 67283 (view NCBI taxonomy browser)
- Links between organisms producing the avoparcin-alpha: Streptomyces candidus
- Avoparcin, a new macrocyclic antibiotic chiral run buffer additive for capillary electrophoresis
Ekborg-Ott KH, Zientara GA, Schneiderheinze JM, Gahm K, Electrophoresis , 1999, Sep,20(12):2438-57.
DOI: 10.1002/(SICI)1522-2683(19990801)20:12<2438::AID-ELPS2438>3.0.CO;2-C
pubMed: 10499337
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