List of all monomers
- Aad*
- Aad*
- Ahad: alpha-amino-hydroxyadipic acid
- Aad: 2-Aminoadipic acid
Aib*- Aib*
- Aib: 2-Aminoisobutyric acid
- Ac-Aib: N-Acetyl-2-aminoisobutyric acid
Ala+Gly- Ala*
- bU-dAla: beta-ureido-dehydroAlanine
- NMe-Ala: N-Methyl-Alanine
- NMe-bAla: N-methyl-beta-alanine
- dh-Ala: dehydroalanine
- NdMe-Ala: N-dimethyl-Alanine
- Ala: Alanine
- D-Ala: D-Alanine
- bAla: beta-Alanine
- NFo-Ala: N-formyl-Alanine
- D-3OMe-Ala: D-3-methoxyalanine
- D-NFo-Ala: D-N-formyl-Alanine
Gly*- Gly: Glycine
- NMe-Gly: N-Methyl-Glycine
- D-F-ph-Gly: D-4-fluoroPhenylGlycin
- NMe-Ph-Gly: N-methyl-phenylglycine
- Ph-Gly: phenylglycine
- D-ph-Gly: D-PhenylGlycine
- Eta: Ethanolamine
- aFo-Gly: alpha-formylGlycine
Asx- Asn*
- bMe-Asn: beta-methyl-asparagine
- D-OH-Asn: D-HydroxyAsparagine
- D-Asn: D-Asparagine
- NMe-Asn: N-methylasparagine
- D-PO-Asn: D-PhosphateAsparagine
- D-N2Me-Asn: D-N2-methyl-asparagine
- OH-Asn: Hydroxyasparagine
- Asn: Asparagine
- D-N2Me-bOH-Asn: D-beta-hydroxy-N2-methyl-asparagine
Asp*- D-bMe-Asp: D-beta-methyl-aspartic acid
- Asp: Aspartic Acid
- OH-Asp: Hydroxyaspartic acid
- D-Asp: D-Aspartic Acid
- bOMe-Asp: beta-methoxy-aspartic acid
- D-OH-Asp: D-Hydroxyaspartic acid
- OMe-Asp: methoxyaspartic acid
- bMe-Asp: beta-methyl-aspartic acid
Bmt*- Bmt*
- Me2-Bmt: 4-butenyl-4-methyl-N,4-methyl threonine
- Bmt: 4-butenyl-4-methyl threonine
- 3d-NMe-Bmt: 3-Desoxy-Methyl-4-butenyl-4-methyl threonine
- NMe-Bmt: N-methyl-4-butenyl-4-methyl threonine
Bz*- Bz*
- Gen: gentisic acid
- pNH2-Bz: Para-amino benzoic acid
- Bz: benzoic acid
- diOH-Bz: 2,3-dihydroxybenzoic acid
- pOH-Bz: para-hydroxy-benzoic acid
Cap*- Cap*
- Cap: capreomycidine
- 5OH-Cap: 5-hydroxy-capreomycidine
Carbohydrate- Ara*
- D-Ara: D-arabinose
- Ara: arabinose
CH*- Oli: L-Olivose
- Ere: L-eremosamine
- Aco: L-acosamine
- Act: L-actinosamine
- D-Man: D-mannose
- Ria: L-ristosamine
- Lyx: lyxose
Gal*- bD-Gal: beta-D-galactose
- D-Gal: D-galactose
Glc*- Glc: L-glucose
- D-Glc: D-Glucose
Rha*- 2OMe-Rha: O-methyl-L-rhamnose
- Rha: L-rhamnose
Van*- Van: L-vancosamine
- 4oxo-Van: 4-oxovancosamine
- U4oxo-Van: ureido-4-oxovancosamine
Chromophores- Chromophores
- ChrAct: actinomycin chromophore
- ChrA: azotobactins chromophore
- ChrP: pyoverdin chromophore
- ChrI: isopyoverdin chromophore
- ChrD: 5,6-dihydropyoverdin chromophore
Cit*- Cit*
- Cit: Citrulline
- D-Cit: D-Citrulline
Cma*- Cma*
- CMA: coronamic acid
- norCMA: norcoronamic acid
Cys*- Cys*
- NMe-Cys: N-methylcysteine
- Cys: Cysteine
- diMe-Cys: N,S-dimethylcysteine
- CysA: cysteic acid
- D-CysA: D-cysteic acid
- aMe-Cys: alpha-methylcysteine
- D-Cys: D-Cysteine
- dhCys: dehydro-cysteine
Dab*- Dab*
- Iba: 2-amino-4-iminobutanoic acid
- Dab: 2,4-diaminobutyric acid
- D-Dab: D-2,4-diaminobutyric acid
Dap*- Dap*
- Dap: Dolaproine
- dDap: O-desmethyldolaproine
Dbu*- Dbu*
- L-Dbu: (2S,3S)-2,3-diaminobutyric acid
- D-Dbu: (2R,3R)-2,3-diaminobutyric acid
- Dbu: (2S)-2,3-diaminobutyric acid
Dil*- Dil*
- dDil: N-desmethyldolaisoleucine
- Dil: Dolaisoleucine
Dpr*- Dpr*
- Dpr: 2,3-Diaminopropionic acid
- NAc-Dpr: N1-acetyl-2,3-Diaminopropionic acid
- NFo-Dpr: N1-formyl-2,3-Diaminopropionic acid
End*- End*
- D-End: D-enduracididine
- End: enduracididine
FA- FA*
- C12:0: dodecanoic acid
- Isovaleric_acid: 3-methylbutanoic acid
- iC9:2(2.t4): 2,trans4-7-methyl-octenoic acid
- iC9:0: 7-methyloctanoic acid
- iC8:0: 6-methylheptanoic acid
- iC7:0: 5-methyl-hexanoic acid
- iC5:0-OH(2)-CA(4): 2-hydroxy-3-methyl-butanedioic acid
- aC9:0-OH(2)-NH2(3): alpha-hydroxy-6-methyl-3-aminooctanoic acid
- iC17:0-NH2(3): 3-amino-15-methyl-hexadecanoic acid
- iC16:0-NH2(3): 3-amino-14-methyl-pentadecanoic acid
- iC15:0-NH2(3): 3-amino-13-methyl-tetradecanoic acid
- iC14:1(3): 12-methyl-3-tridecenoic acid
- iC14:0-NH2(3): 3-amino-12-methyl-tridecanoic acid
- aC9:0: 6-methyloctanoic acid
- Tig: tiglic acid
- iC14:0: 12-methyl-tridecanoic acid
- aC17:0-NH2(3): 3-amino-14-methyl-hexadecanoic acid
- iC13:1(3): 11-methyl-3-dodecenoic acid
- iC13:0: 11-methyldodecanoic acid
- iC12:2(2.t4): 10-methyl-2,trans4-undecanoic acid
- iC12:0: 10-methylundecanoic acid
- aC15:1(3): 12-methyl-3-tetradecenoic acid
- iC11:0: 9-methyldecanoic acid
- iC10:2(2.t4): 2,trans4-8-methyl-noneoic acid
- iC10:0: 8-methylnonanoic acid
- aC15:0-NH2(3): 3-amino-12-methyl-tetradecanoic acid
- aC15:0: 12-methyltetradecanoic acid
- aC13:2(2.t4): 10-methyl-2,trans4-dodecenoic acid
- aC13:1(3): 10-methyl-3-dodecenoic acid
- aC13:0: 10-methyldodecanoic acid
- C10:0: decanoic acid
- C10:0-NH2(2)-oxo(8): 2-amino-8-oxo-decanoic acid
- C10:0-OH(2)-NH2(3): 3-amino-2-hydroxy decanoic acid
- C10:0-OH(8)-NH2(2): 8-hydroxy-2-amino-decanoic acid
- C10:0-OH(9)-NH2(2): 9-hydroxy-2-amino-decanoic acid
- C10:0-OH(9)-NH2(2)-oxo(8): 9-hydroxy-2-amino-8-oxo-decanoic acid
- C10:0-oxo(3): 3-oxo-decanoic acid
- C12:1(5): 2-methyl-5-dodecenoic acid
- C13:0-NH2(3): 3-amino-tridecanoic acid
- C14:0: tetradecanoic acid
- C14:0-NH2(3): 3-amino-tetradecanoic acid
- C14:1(7): 7-tetradecenoic acid
- C15:0-NH2(3): 3-amino-pentadecanoic acid
- C16:0: hexadecanoic acid
- C16:0-NH2(3): 3-amino-hexadecanoic acid
- C16:1(7): 7-hexadecenoic acid
- C16:1(9): 9-hexadecenoic acid
- C18:1(9): 9-octadecenoic acid
- C4:0: butanoic acid
- C4:0-OH(2.3.4): 2,3,4-trihydroxy-butanoic acid
- C6:0: hexanoic acid
- C6:0-OH(3.5)-NH2(4): 3.5-hydroxy-4-amino-hexadecanoic acid
- C7:0: heptanoic acid
- C8:0: octanoic acid
- C8:0:1(7): oct-7-ynoic acid
- aC10:0: 7-methylnonanoic acid
- aC11:0: 8-methyldecanoic acid
- C8:2(2.t4): 2,trans4-octenoic acid
- C9:0: nonanoic acid
FA-OH*- C9:1(4)-Me(2.4.6)-OH(8): 8-hydroxy-2,4,6-trimethyl-4-nonenoic acid
- aC11:2(4.6)-Me(2.6)-OH(2.3): 2,3-dihydroxy-2,6,8-trimethyldeca-(4Z,6E)-dienoic acid
- aC13:0-OH(3): 3-hydroxy-10-methyl-dodecanoic acid
- aC15:0-OH(3): 3-hydroxy-12-methyl-tetradecanoic acid
- aC17:0-OH(3): 3-hydroxy-14-methyl-hexadecanoic acid
- aC6:0-OH(2.3): 2,3-dihydroxy-3-methylpentanoic acid
- aC9:0-OH(3): 3-hydroxy-6-methyloctanoic acid
- C10:0-OH(3): 3-hydroxy-decanoic acid
- C11:0-OH(3): 3-hydroxy-undecanoic acid
- C11:2(t2.t8)-Me(2.6.8)-OH(5.7): 2,6,8-trimethyl-5,7-dihydroxy-trans2,trans8-undecenoic acid
- C12:0-OH(3): 3-hydroxy-dodecanoic acid
- C12:1(5)-OH(3): 3-hydroxy-5-dodecenoic acid
- C13:0-OH(3): 3-hydroxy-tridecanoic acid
- C13:2(t4.t6)-OH(2.3): 2,3-dihydroxy-trans4,trans6-tridecenoic acid
- C14:0-OH(3): 3-hydroxy-tetradecanoic acid
- C14:0-OH(3.4): 3,4-dihydroxy-tetradecanoic acid
- C14:2(t4.t6)-OH(2.3): 2,3-dihydroxy-trans4,trans6-tetradecenoic acid
- C15:0-OH(3): 3-hydroxy-pentadecanoic acid
- C15:2(t4.t6)-OH(2.3): 2,3-dihydroxy-trans4,trans6-pentadecenoic acid
- C16:0-OH(3): 3-hydroxy-hexadecanoic acid
- C16:0-OH(3.4): 3,4-dihydroxy-hexadecanoic acid
- C16:1(9)-OH(3): 3-hydroxy-9-hexadecenoic acid
- C18:1(9)-OH(3): 3-hydroxy-9-octadecenoic acid
- C4:0-OH(2.3): 2,3-dihydroxy-butanoic acid
- C4:0-OH(3): 3-hydroxybutanoic acid
- C4:1(3)-OH(2): 2-hydroxy-3-butenoic acid
- C5:1(4)-OH(2): beta-vinyllactic acid
- C6:0-OH(3): 3-hydroxy-hexanoic acid
- C7:0-OH(3): 3-hydroxy-heptanoic acid
- C8:0-OH(3): 3-hydroxy-octanoic acid
- C8:1(7)-Me(2.2)-OH(3): 2,2-dimethyl-3-hydroxy-7-octenoic acid
- C9:0-OH(3): 3-hydroxy-nonanoic acid
- iC11:0-OH(3): 3-hydroxy-9-methyl-decanoic acid
- iC12:0-OH(3): 3-hydroxy-10-methyl-undecanoic acid
- iC13:0-OH(3): 3-hydroxy-11-methyl-dodecanoic acid
- iC14:0-OH(3): 3-hydroxy-12-methyl-tridecanoic acid
- iC15:0-OH(3): 3-hydroxy-13-methyl-tetradecanoic acid
- iC16:0-OH(3): 3-hydroxy-14-methyl-pentadecanoic acid
- iC17:0-OH(3): 3-hydroxy-15-methyl-hexadecanoic acid
- iC5:0-OH(2.3): 2,3-dihydroxy-3-methyl-butanoic acid
- iC5:0-OH(2.4): 2,4-dihydroxy-3-methyl-butanoic acid
- iC6:0-OH(2.4): 2,4-dihydroxy-4-methylpentanoic acid
- iC9:0-OH(3): 3-hydroxy-7-methyl-octanoic acid
FAD*- C5:0-OH(2)-Ep(4): 2-hydroxy-3-(oxiran-2-yl)propanoic acid
- C9:1(Me4)-Me(2.4.6)-OH(8)-Oxo(5): 5-oxo-8-hydroxy-2,4,6-trimethyl-4-nonaneic acid
- C8:2(5.7)-Me(6)-OH(4)-NH2(3)-brPh(8): 3-amino-4-hydroxy-6-methyl-8-(p-bromophenyl)-5,7-octadienoic acid
- C6:0-Ep(2): 2-epoxy-hexanoic acid
- C6:0-Me(2.2)-OH(3): 2,2-dimethyl-3-hydroxyhexanoic acid
- C6:0-Me(2)-NH2(3): 2-methyl-3-aminohexadecanoic acid
- C6:0-Me(5.5)-oxo(2): 5,5-dimethyl-2-oxo-hexanoic acid
- C10:0-Me(4)-OH(3): 3-hydroxy-4-methyl-decanoic acid
- C8:2(5.7)-Me(6)-OH(4)-NH2(3)-Ph(8): 3-amino-4-hydroxy-6-methyl-8-phenyl-5,7-octadienoic acid
- C6:0-OMe(3): 3-methoxy-hexanoic acid
- C10:0-Me(2)-OH(3): 3-hydroxy-2-methyl-decanoic acid
- C10:0-Me(2.2.4)-OH(3)-OMe(7): 3-hydroxy-2,2,4-trimethyl-7-methoxydecanoic acid
- C7:0-Me(2)-OH(3): 3-hydroxy-2-methyl-heptanoic acid
- C10:0-Me(2.4)-oxo(9): 9-oxo-2,4-dimethyldecanoic acid
- iC8:0-Me(2.4)-OH(3): 2,4,6-trimethyl-3-hydroxy-heptanoic acid
- C9:0-Me(2)-OH(3): 3-hydroxy-2-methyl-nonanoic acid
- C8:0:1(7)-Me(2): 2-methylact-7-ynoic acid
- C8:0:1(7)-Me(2.2)-OH(3): 2,2-dimethyl-3-hydroxy-7-octynoic acid
- C8:0:1(7)-Me(2)-NH2(3): 3-amino-2-methyloct-7-ynoic acid
- C8:0:1(7)-Me(2)-OH(3): 2-methyl-3-hydroxy-7-octynoic acid
- C8:0-Me(2.2)-OH(3): 2,2-dimethyl-3-hydroxy-octanoic acid
- C8:0-Me(4)-OH(3): 4-methyl-3-hydroxy-octanoic acid
- C10:0-Me(2.2.4)-OH(3.7): 3-hydroxy-2,2,4-trimethyl-7-hydroxydecanoic acid
- C12:3(7.9.11)-Me(6)-OH(2.4.5)-NH2(3)-Ph(12): 3-amino-6-methyl-12-phenyl-2,4,5-trihydroxydodeca-7,9,11-trienoic acid
- C10:0:1(9)-Me(2.4): 2,4-dimethyl-dec-9-ynoic acid
- C12:3(7.9.11)-Me(6.10)-OH(2.4.5)-NH2(3)-Ph(12): 3-amino-6,10-dimethyl-12-phenyl-2,4,5-trihydroxydodeca-7,9,11-trienoic acid
- C8:1(7)-OH(2.4.5)-NH2(3)-Ph(8): 3-amino-8-phenyl-2.4.5-trihydroxyoct-7-enoic acid
- C4:0-Me(2): 2-methyl-butanoic acid
- C12:1(11)-Me(6)-OH(2.4.5)-NH2(3)-mPhe(11): 3-amino-6-methyl-12-(p-methoxyphenyl)-2,4,5-trihydroxydodec-11-enoic acid
- C9:1(8)-Me(2): 2-methyl-8-noneic acid
- C4:0-OH(2.3)-Cl(4): 2,3-dihydroxy-4-chloro-butanoic acid
- C4:0-OH(2)-Ep(3): 2-hydroxy-3-epoxy-butanoic acid
- C11:0-Me(2)-OH(3): 3-hydroxy-2-methyl-undecanoic acid
- C10:2(7.9)-OH(2.4.5)-NH2(3)-ePh(10): 3-amino-10-(p-ethoxyphenyl)-2,4,5-trihydroxydeca-7,9-dienoic acid
- C10:0-NH2(2)-Ep(9)-oxo(8): 2-amino-9,10-epoxi-8-oxodecanoic acid
Glx- Gln*
- Gln: Glutamine
- 3Me-4Me-Gln: 3,4-dimethylglutamine
- D-Gln: D-Glutamine
- NFo-Gln: N-formyl-Glutamine
- bOH-Gln: beta-hydroxyglutamine
- NMe-Gln: N-methylglutamine
- bMe-Gln: beta-methylglutamine
- D-bMe-Gln: D-beta-methylglutamine
Glu*- Glu: Glutamic Acid
- D-Glu: D-Glutamic Acid
- MeO-Glu: Glutamic Acid methyl ester
- 3Me-Glu: 3-Methyl-Glutamic acid
- 2Me-3Me-pGlu: 2,3-dimethylpyroglutamic acid
- pGlu: pyroglutamic acid
- D-MeO-Glu: D-Glutamic Acid methyl ester
- MeO-D-Glu: D-Glutamic Acid methyl ester
Hap*- Hap*
- Hysp: hydroxysecbutyl acetyl propionyl
- Hip: hydroxyisovalerylpropionyl
- Hap: hydroxyacetyl propionyl
His*- His*
- OH-His: Hydroxyhistidine
- His: Histidine
Hiv*- Hiv*
- Hiv: 2-hydroxyisovalerate
- D-Hiv: D-2-hydroxyisovalerate
Hpg*- Hpg*
- D-Dhpg: D-3,5-dihydroxyphenylglycine
- D-OH-dHpg: D-N-hydroxy-dehydro-HydroxyPhenylGlycine
- Cl-Hpg: 3-chloro-4-hydroxyphenylglycine
- Hpg: HydroxyPhenylGlycine
- Dhpg: 3,5-dihydroxyphenylglycine
- D-Hpg: D-HydroxyPhenylGlycine
- Cl2-Hpg: 3,5-dichloro-4-hydroxyphenylglycine
- NMe-Hpg: N-methyl-HydroxyPhenylGlycine
- OH-dHpg: N-hydroxy-dehydro-HydroxyPhenylGlycine
Kyn*- Kyn*
- D-Kyn: D-kynurenine
- Kyn: kynurenine
Lac*- Lac*
- 4OH-D-Ph-Lac: 4-hydroxy-D-phenyl-lactate
- Ph-Lac: Phenyl-lactate
- Lac: Lactic acid
- D-Ph-Lac: D-Phenyl-lactate
- D-Lac: D-lactic acid
Lys*- Lys*
- bLys: beta lysine
- Lys: Lysine
- D-Lys: D-Lysine
- NFo-Lys: N-formyl-lysine
- D-NFo-Lys: D-N-formyl-lysine
- OH-bLys: hydroxy-beta lysine
Met*- Met*
- bbMe2-O-Met: beta,beta-dimethyl-Methionine-S-oxide
- O2-Met: Methionine sulfone
- O-Met: Methionine-S-oxide
- Met: Methionine
Nonpolar- Abu*
- NFo-D-Abu: N-formyl-D-aminobutyric acid
- OH-4Abu: 4-amino-3-hydroxybutyric acid
- D-Abu: D-2-Aminobutyric acid
- dhAbu: 2,3-dehydro-2-aminobutyric acid
- 2Dh-Mabu: 2-methylamino-2-dehydrobutyric acid
- Abu: 2-Aminobutyric acid
Hil*Ile*- aIle: allo-Isoleucine
- D-aIle: D-allo-Isoleucine
- NMe-OMe-Ile: N,O-dimethyl-isoleucine
- D-Ile: D-Isoleucine
- diMe-aIle: N,gamma-alloisoleucine
- NMe-OH-Ile: N-methyl-hydroxyisoleucine
- NMe-NAc-Ile: N-methyl-N-acetyl-Isoleucine
- NMe-Ile: N-Methyl-Isoleucine
- NMe-aIle: N-methyl-alloIsoleucine
- D-NMe-aIle: D-N-methyl-alloisoleucine
- Cl-Ile: Chloro-Isoleucine
- NFo-Ile: N-formyl-Isoleucine
- NAc-Ile: N-acetyl-Isoleucine
- MeOx-Ile: methyloxazoline-isoleucine
- Ileol: Isoleucinol
- Ile: Isoleucine
- bMe-Ile: beta-methylisoleucine
Leu*- NFo-Leu: N-formyl-Leucine
- D-t-Leu: D-tert-Leu
- t-Leu: tert-Leu
- Cl3-NMe-Leu: tri-chloro-N-methyl-Leucine
- Cl3-NMe-dhLeu: tri-chloro-N-methyl-dehydroLeucine
- Cl3-5OH-NMe-Leu: tri-chloro-5-hydroxy-N-methyl-Leucine
- Cl3-2OH-NMe-Leu: tri-chloro-2-hydroxy-N-methyl-Leucine
- D-NMe-Leu: D-N-methyl-Leucine
- NMe-bMe-Leu: N,beta-dimethylLeucine
- D-Leu: D-Leucine
- Leuol: Leucinol
- Leu: Leucine
- NMe-Leu: N-Methyl-Leucine
- Cl2-NMe-dhLeu: di-chloro-N-methyl-dehydroLeucine
- NtMe-Leu: N-trimethyl-leucine
- k-Leu: keto-Leucine
- OAc-Leuol: O-acetyl-leucinol
- 3OH-Leu: 3-hydroxyleucine
- NdMe-Leu: N-dimethyl-leucine
- NAc-Leu: N-acetyl-Leucine
- Cl2-NMe-Leu: di-chloro-N-methyl-Leucine
Nva*- Nva: Norvaline
- D-Nva: D-Norvaline
- Et-Nva: alpha-ethylnorvaline
- D-NMe-Nva: D-N-methyl-norvaline
Val*- D-Val: D-Valine
- NOMe-Ac-Val: N-methoxyacetyl-valine
- Valol: valinol
- bOH-NMe-Val: beta-hydroxy-N-Methyl-Valine
- D-NMe-Val: D-N-Methylvaline
- NFo-Val: N-formyl-Valine
- D-bOH-Val: D-beta-hydroxyvaline
- Ac-Ival: N-acetyl-isovaline
- Ivalol: isovalinol
- gOH-NMe-Val: gama-hydroxy-N-Methyl-Valine
- D-Ival: D-isovaline
- Ival: isovaline
- Val: Valine
- NMe-hv-Val: N-methyl homo vinylogous Valine
- bOH-Val: beta-hydroxyvaline
- Ac-Val: N-Acetylvaline
- NMe-Val: N-Methyl-Valine
Orn*- Orn*
- D-OH-Orn: D-N5-HydroxyOrnithine
- D-Ac-OH-Orn: D-N-acetyl-HydroxyOrnithine
- D-OH-cOrn: D-Hydroxy-cycloOrnithine
- D-Orn: D-ornithine
- Fo-OH-Orn: N6-formyl-HydroxyOrnithine
- D-Fo-OH-Orn: D-formyl-hydroxyOrnithine
- Ac-OH-Orn: N-acetyl-HydroxyOrnithine
- NAc-Fo-OH-Orn: N-acetyl-N6-formyl-N6-hydroxyOrnithine
- OH-cOrn: Hydroxy-cycloOrnithine
- OH-Orn: N5-hydroxy ornithine
- Orn: Ornithine
Phe+Trp- Phe*
- Hph: Homophenylalanine
- D-bPhe: D-beta-phenylalanine
- bPhe: beta phenylalanine
- NMe-Phe: N-Methyl-Phenylalanine
- bOH-NMe-Phe: beta-hydroxy-N-Methyl-Phenylalanine
- bOH-Br-Phe: beta-hydroxy-bromophenylalanine
- NOMe-Ac-D-Phe: N-methoxyacetyl-D-phenylalanine
- Ac-Phe: N-acetylphenylalanine
- 3Me-Phe: 3-methylphenylalanine
- NMe-dPhe: N-methyl-2,3-dehydrophenylalanine
- bMe-Br-Phe: beta-methyl-bromophenylalanine
- Pheol: phenylalaninol
- bMe-Phe: beta-methyl-phenylalanine
- Phe: Phenylalanine
- diOH-Phe: 3,4-dihydroxyphenylalanine
- NMe-Me2A-Phe: N-methyl-4-dimethylamino-phenylalanine
- Br-Phe: bromophenylalanine
- D-NMe-Phe: D-N-Methyl-Phenylalanine
- NMe-MeA-Phe: N-methyl-4-methylamino-phenylalanine
- D-Phe: D-Phenylalanine
Trp*- NMe-Br-Trp: N-methyl-2-Bromo-tryptophan
- NMe-Cl-Trp: N-methyl-6-chloro-tryptophan
- D-Cl-Trp: D-6’-chloro-tryptophan
- bbNMe-NMe-Trp: beta,beta,N1,N-tetramethyltryptophan
- Trp: Tryptophan
- Ac-Trp: N-acetyltryptophan
- pTrp: phototryptophan
- OMe-Trp: methoxytryptophan
- OH-Trp: 5-hydroxytryptophan
- D-Trp: D-Tryptophan
- Trpol: tryptophanol
- N1-COOH-bhTrp: N1-carboxy-bichomotryptophan
- dh-Trp: 2,3-Dehydro-Tryptophan
- 1Me-Trp: N1-methyl-tryptophan
- NMe-OH-Trp: N-methyl-5-hydroxytryptophan
- D-Cl-CONH2-Trp: D-6-chloro-N2-formamidotryptophan
- Br-OH-Trp: 2-bromo-5-hydroxytryptophan
- Br-Trp: 5-bromo-tryptophan
- bbMe-NMe-Trp: beta,beta,N-trimethyltryptophan
- D-COOH-Trp: D-2-carboxy-tryptophan
- NMe-Cl-OH-Trp: N-methyl-6-chloro-5-hydroxytryptophan
PKS- PKS
- CFA: coronafacic acid
- Adda: 3-amino-9-methoxy-2,6,8-trimethyl-10-phenyldeca-4,6-dienoic acid
- Me-Suc: methyl-succinimide
- ADMAdda: O-Acetyl-O-demethylAdda.
- C8:3(t2.t4.t6): trans2,trans4,trans6-trioctaneic acid
- DMAdda: O-demethyl-Adda
- C6:2(t2.t4): trans2,trans4-dihexaneic acid
Pyr*- Pyr*
- Pyr: pyrrolidone
- Pya: pyruvate
- OH-Pyr: hydroxy pyrrolidone
- dPyr: dehydropyrrolidone
- Dpy: Dolapyrrolidone
Spd*- Spd*
- Spd: spermidine
- GSpd: guanylspermidine
- NSpd: norspermidine
Sta*- Sta*
- Sta: statine
- Nst: norstatine
- Ist: isostatine
Thr*- Thr*
- aThr: allo-Threonine
- D-Thr: D-Threonine
- 4OH-Thr: 4-Hydroxythreonine
- NMe-Thr: N-methylthreonine
- D-aThr: D-allo-Threonine
- 4Cl-Thr: 4-Chloro-Threonine
- Thr: Threonine
- OMe-Thr: O-methyl-threonine
Thz*- Thz*
- OMe-bAla-Thz: 1-methoxy-beta-alanine-thiazole
- Pro-Thz: proline-thiazole
- Ala-Thz: Alanine-thiazole
- NMe-Gly-Thz: N-Methyl-Glycine-thiazole
- Phe-Thz: thiazolylphenylalanine
Vaa*- Vaa*
- Apv: alpha-amino-phenyl-valeric acid
- C5:0-NH2(3): 3-amino-pentanoic acid
- Amv: alpha-amino-methoxyphenyl-valeric acid
- Me-Vaa: 3-methylvaleric acid
- 4Me-Hva: 2-hydroxy-4-methylpentanoic acid, 2-hydroxy-4-methylvaleric acid
- Ahv: alpha-amino-hydroxyphenyl-valeric acid
- D-Hmp: D-2-hydroxy-3-methylpentanoic acid
- OSu-Hmp: O-sulfate-2-hydroxy-3-methylpentanoic acid
- 4Me-D-Hva: 4-Methyl-D-2-hydroxy-valeric acid, 4-Methyl-D-2-hydroxy-pentanoic acid
- Hmp: 2-hydroxy-3-methyl-pentanoic acid
XArg- Arg*
- v-Arg: vinylogous arginine
- D-Arg: D-Arginine
- ck-Arg: cyclo alpha-ketoarginine
- Argal: arginal
- Arg: Arginine
- diOH-Arg: 3,4-dihydroxyArginine
- hk-Arg: hydrated alpha-ketoarginine
- k-Arg: alpha-ketoarginine
Har*- D-Har: D-homoarginine
- Har: homoarginine
XPro- Hpr*
- 4oxo-Hpr: 4-oxo-homoproline
- Hpr: homoproline
- D-Hpr: D-homoproline
Pro*- 4oxo-5Me-Pro: 4-oxo-5-methylproline
- NFo-Pro: N-Formyl-Proline
- 4oxo-Pro: 4-oxo-proline
- 5Me-Pro: 5-methylproline
- D-Pro: D-Proline
- Pro: Proline
- Ac-Pro: acetylproline
- D-4OH-Pro: D-hydroxyproline
- 3OH-Pro: 3-Hydroxyproline
- ProC: proline carboxamid
- 3OH-5Me-Pro: 3-Hydroxy-5-methylproline
- 3Me-Pro: 3-methylproline
- Cl2-Pro: 3,4-dichloro-proline
- 4OH-Pro: 4-Hydroxyproline
- 4Me-Pro: 4-methylproline
XSer- Hse*
- D-Hse: D-Homoserine
- Hse: Homoserine
Ser*- Ser: Serine
- NMe-Ser: N-Methyl-Serine
- NFo-Iser: N-formyl-isoserine
- D-Ser: D-Serine
- Ph-Ser: phenylserine
- Iser: isoserine
- gSer: alpha-guanidino Serine
- D-NMe-Ser: N-Methyl-D-Serine
- Ac-Ser: O-acetyl-Serine
- Serol: Serinol
XTyr- Hty*
- NMe-Hty: N-methyl-homotyrosine
- Hty: Homotyrosine
- 3Me-Hty: 3-methyl-homotyrosine
Tyr*- Cl-Tyr: chloro-tyrosine
- D-Cl-NMe-Tyr: D-3-chloro-N-methyl-Tyrosine
- D-I-NMe-Tyr: D-3-iodo-N-methyl-Tyrosine
- bTyr: beta-tyrosine
- Br-Tyr: bromotyrosine
- D-NMe-OMe-Tyr: D-N,O-dimethyl-tyrosine
- bOMe-Tyr: beta-methoxy-tyrosine
- D-Tyr: D-Tyrosine
- dv-Tyr: dehydro vinylogous tyrosine
- bOH-Tyr: beta-hydroxy-tyrosine
- e-Tyr: ethylene inserted tyrosine
- bOH-Cl-Tyr: beta-hydroxy-chloro-tyrosine
- Tyr: Tyrosine
- v-OH-Tyr: vinylogous hydroxy tyrosine
- v-Tyr: vinylogous tyrosine
- NMe-OMe-Tyr: N,O-dimethyl-tyrosine
- NMe-OMe-TyrC: N,O-dimethyl-tyrosinecarboxamid
- NMe-Tyr: N-methyltyrosine
- 3NO2-Tyr: 3-nitrotyrosine
- D-Br-NMe-Tyr: D-3-bromo-N-methyl-Tyrosine
- Cl-NMe-Tyr: Chloro-N-methyl-tyrosine
Unclustered- Aca: Anticapsin
- Agdha: 4-amino-7-guanidino-2,3-dihydroxyheptanoic acid
- Ahp: 3-amino-6-hydroxy-2-piperidone
- Azd: aziridine dicarboxylic acid
- Choi: 2-carboxy-6-hydroxyoctahydroindole
- CO: oxo group
- COOH-Qui: 2-carboxyquinoxaline
- Daz: 2,6-diamino-7-hydroxyazelaic acid
- DHMDA: 8,10-Dimethyl-9-hydroxy-7-methoxytridecadienoic acid
- DHPT: dihydroxyphenylthiazol group
- DMOG: DHP-methyloxazolinyl group
- Doe: Dolaphenine
- Dov: Dolavaline
- Hpa: hydroxypicolinic acid
- Hpoe: 2-hydroxyphenyl-2-oxo-ethanoic acid
- HseL: homoserine lactone
- Ibu: 4-amino-2,2-dimethyl-3-oxopentanoic acid
- Mab: 2-methyl-3-aminobutanoic acid
- Map: 2-methyl-3-aminopentanoic acid
- MCP: N-methylchloropyrrole
- MdCP: N-methyldichloropyrrole-2-carboxylic acid
- Me-AOA: methyl-2-aminooctanoic acid
- NMe-Dha: N-Methyl-dehydroalanine
- NMe-Lan: N-Methyl-Lanthionine
- N-OH-Hta: N-Hydroxy-histamine
- N-Suc: Succinamid acid
- PALOA: propenoyl-alanyloxazole acid
- PAOA: propenoyl-2-aminobutanoyloxazole acid
- Pda: pentanedioic acid
- Pha: phenylacetic acid
- PMST: propenoyl-O-methylserinylthiazole acid
- PT: phosphinothricin
- PTTA: 4-propenoyl-2-tyrosylthiazole acid
- Put: putrescine
- Suc: succinic acid
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